CMSMS adds the tag at the top of the every page. But when you have flash on your page using the new SWFobject 2 in combination with the MooTools 1.2 java script framework, Internet Explorer craches completely

This error presumably will also occur with older versions of SWFobject and/or MooTools and other combinations of java scripts.
The fix is to add a small pies of code that closes the base tag () only in Internet Explorer.
Open the file plugins/function.metadata.php and go to line 44 where it says $result .= "\n\n";
Just add replace it with this line: $result .= "\n\n";
And the problem is fixed.
I suggest adding this change to the distributed file just in case people run into this problem (as it's pretty hard to find anything on the net about this problem)